Comprehensive interrogation of the fission yeast transcription factor regulatory network

TF project outline

To navigate through each plot, use the tool panel (click on the grey square in the right-upper corner to open it).

Link to ChIP data: Clicking on a column in the MS heatmap will select the corresponding ChIP/Input data for this TF.

PomBase link to selected protein

Transcription factor protein interactions (Mass-Spec)

Click on a cell in the heatmap to select a TF and a protein volcano plot will switch to the selected TF and highlight the selected protein

Hold the shift key and mark proteins in the volcano plot by clicking and dragging your mouse over them heatmap will display only the selected proteins

Move the blue box to the right to remove proteins not enriched in any pull-down:

Selected maximum log2 LFQ intensity cutoff:

PomBase link to selected protein UniProt link to selected protein

Transcription factor chromatin binding (ChIP-Seq)

Click on a cell in the heatmap to select a TF and a peak IGV will display the ChIP and Input for the selected sample and switch to the selected peak

Move the blue box to the right to remove peaks not enriched in any ChIP:

Selected maximum log2 Chip/Input cutoff:

Contact: michaela.schwaiger@fmi.ch

Generated with the LinkedCharts library and igv.js